Function to plot variability data
Usage
plot_iiv_data_with_nm(
input_dataset1 = NULL,
input_dataset2 = NULL,
nonmem_dataset = NULL,
xvar = NULL,
yvar = NULL,
yvar_2 = NULL,
log_x_axis = FALSE,
log_x_ticks = logbreaks_x,
log_x_labels = logbreaks_x,
log_y_axis = FALSE,
log_y_ticks = logbreaks_y,
log_y_labels = logbreaks_y,
geom_point_sim_option = FALSE,
geom_point_data_option = FALSE,
show_ind_profiles = FALSE,
y_median = NULL,
y_min = NULL,
y_max = NULL,
line_color_1 = "black",
line_color_2 = "black",
stat_summary_data_option = FALSE,
nm_yvar = NULL,
xlabel = xvar,
ylabel = yvar,
debug = FALSE,
title = NULL,
show_x_intercept = FALSE,
x_intercept_value = NULL,
show_y_intercept = FALSE,
y_intercept_value = NULL
)Arguments
- input_dataset1
simulated dataframe for Model 1
- input_dataset2
simulated dataframe for Model 2
- nonmem_dataset
uploaded NONMEM dataset
- xvar
Name of X-variable to be plotted, string
- yvar
Name of Y-variable to be plotted, string (Model 1)
- yvar_2
Name of Y-variable to be plotted, string (Model 2)
- log_x_axis, log_x_ticks, log_x_labels, log_y_axis, log_y_ticks, log_y_labels
Log options and axis tick labels
- geom_point_sim_option, geom_point_data_option
Plotting sampling points
- show_ind_profiles
If TRUE, plots individual profiles instead of prediction intervals
- y_median
Prediction interval median (when show_ind_profiles == FALSE)
- y_min
Prediction interval min (when show_ind_profiles == FALSE)
- y_max
Prediction interval max (when show_ind_profiles == FALSE)
- line_color_1
Color for Model 1 prediction intervals
- line_color_2
Color for Model 2 prediction intervals
- stat_summary_data_option
Plots median line of dataset
- nm_yvar
Name of Y-variable for NONMEM dataset, string
- xlabel
Nice label for X-axis, string
- ylabel
Nice label for Y-axis, string
- debug
When TRUE, displays debugging messages
- title
Title for plot
- show_x_intercept
Display X-intercept for threshold calculation
- x_intercept_value
Numeric for X-intercept
- show_y_intercept
Display Y-intercept for threshold calculation
- y_intercept_value
Numeric for Y-intercept