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Write files needed for reporting in MultiQC.

Usage

write_multiqc_data(
  analysis_details_frame,
  sequencing_run_details_frame,
  variant_stats,
  tmb_msi_data_frame,
  folder_path
)

Arguments

analysis_details_frame

data frame with analysis details (get_analysis_details_df)

sequencing_run_details_frame

data frame with sequencing run details (get_sequencing_run_details_df)

variant_stats

data frame with variant type statistics (get_count_df)

tmb_msi_data_frame

data frame with tmb and msi statistics (get_metrics_df)

folder_path

path to output folder

Value

the files needed for generating a MultiQC report