Filters for variant data for variant consequences. Keeps any variant with a consequence matching the list of submitted consequences

Filters for variant data for variant consequences. Keeps any variant with a consequence matching the list of submitted consequences

Usage

keep_consequences(variant_df, consequences, type_column = "consequence_s")

Arguments

variant_df

Data frame witgh variant data

consequences

List of consequences to keep

type_column

Name of column with variant types (default: consequence_s)

Value

data frame with consequences kept as specified